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bwa-0.7.17-2.el8 RPM for s390x

From EPEL 8 for s390x / Packages / b

Name: bwa Distribution: Fedora Project
Version: 0.7.17 Vendor: Fedora Project
Release: 2.el8 Build date: Sun May 31 13:46:54 2020
Group: Unspecified Build host: buildvm-s390x-21.s390.fedoraproject.org
Size: 663577 Source RPM: bwa-0.7.17-2.el8.src.rpm
Packager: Fedora Project
Url: http://bio-bwa.sourceforge.net/
Summary: Burrows-Wheeler Alignment tool
BWA is a program for aligning sequencing reads against a large
reference genome (e.g. human genome). It has two major components, one
for read shorter than 150bp and the other for longer reads.

Provides

Requires

License

GPLv3

Changelog

* Fri May 22 2020 Jun Aruga <jaruga@redhat.com> - 0.7.17-2
  - Enable non-x86_64 CPU architectures with simde.
  - Set -O3 for the better performance.
* Thu Apr 16 2020 Jun Aruga <jaruga@redhat.com> - 0.7.17-1
  - Update to upstream release 0.7.17
  - Move bwakit files to data directory to avoid conflicts.
* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-10
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-9
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-8
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Sat Jul 21 2018 Adam Huffman <bloch@verdurin.com> - 0.7.15-7
  - Add BR for gcc
* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-6
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-5
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-4
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-3
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.15-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Thu Jun 02 2016 Adam Huffman <bloch@verdurin.com> - 0.7.15-1
  - Update to upstream release 0.7.15
* Thu Mar 24 2016 Adam Huffman <bloch@verdurin.com> - 0.7.13-1
  - Update to upstream release 0.7.13
* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.12-3
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.7.12-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Sat Jan 03 2015 Adam Huffman <bloch@verdurin.com> - 0.7.12-1
  - Update to upstream 0.7.12
* Sat Dec 27 2014 Adam Huffman <bloch@verdurin.com> - 0.7.11-1
  - Update to upstream 0.7.11
  - First attempt to include new bwakit packaging
* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.7.10-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Sun Jul 20 2014 Adam Huffman <bloch@verdurin.com> - 0.7.10-1
  - Update to upstream 0.7.10
* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.7.9a-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Thu May 29 2014 Adam Huffman <bloch@verdurin.com> - 0.7.9a-1
  - Update to upstream 0.7.9a
  - Docs now in Markdown format, including new README.md
* Sun Oct 27 2013 Adam Huffman <bloch@verdurin.com> - 0.7.5a-2
  - Remove nosse2 patch because 0.7+ versions only build on x86_64
* Sat Oct 26 2013 Adam Huffman <bloch@verdurin.com> - 0.7.5a-1
  - Update to upstream 0.7.5a
* Sat Aug 03 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.6.1-7
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
* Thu Jul 18 2013 Petr Pisar <ppisar@redhat.com> - 0.6.1-6
  - Perl 5.18 rebuild
* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.6.1-5
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.6.1-4
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
* Mon May 28 2012 Dan HorĂ¡k <dan[at]danny.cz> - 0.6.1-3
  - enable SSE2 on x86_64 only, fixes build on secondary arches
* Sun May 13 2012 Adam Huffman <verdurin@fedoraproject.org> - 0.6.1-2
  - add patch to avoid SSE2 on i386
* Wed Jan 11 2012 Adam Huffman <verdurin@fedoraproject.org> - 0.6.1-1
  - update to 0.6.1
* Thu Feb 17 2011 Adam Huffman <bloch@verdurin.com> - 0.5.9-1
  - new upstream release 0.5.9
* Tue Feb 08 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org>
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
* Wed Jan 05 2011 Adam Huffman <bloch@verdurin.com> - 0.5.8c-1
  - upstream bugfix release
* Tue Jul 20 2010 Adam Huffman <bloch@verdurin.com> - 0.5.8a-1
  - new upstream release
* Sat May 29 2010 Adam Huffman <bloch@verdurin.com> - 0.5.7-2
  - fix source URL
  - install manpage
  - fix cflags
* Fri May 28 2010 Adam Huffman <bloch@verdurin.com> - 0.5.7-1
  - initial version

Files

/usr/bin/bwa
/usr/bin/qualfa2fq.pl
/usr/bin/xa2multi.pl
/usr/lib/.build-id
/usr/lib/.build-id/d1
/usr/lib/.build-id/d1/e1aecb24e6356227349ea466a899dbe38af24b
/usr/share/bwa/bwakit
/usr/share/bwa/bwakit/README.md
/usr/share/bwa/bwakit/bwa-postalt.js
/usr/share/bwa/bwakit/run-HLA
/usr/share/bwa/bwakit/run-bwamem
/usr/share/bwa/bwakit/run-gen-ref
/usr/share/bwa/bwakit/typeHLA-selctg.js
/usr/share/bwa/bwakit/typeHLA.js
/usr/share/bwa/bwakit/typeHLA.sh
/usr/share/doc/bwa
/usr/share/doc/bwa/COPYING
/usr/share/doc/bwa/NEWS.md
/usr/share/doc/bwa/README-alt.md
/usr/share/doc/bwa/README.md
/usr/share/man/man1/bwa.1.gz


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Fabrice Bellet, Sun Nov 17 06:25:38 2024