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Name: samtools | Distribution: Fedora Project |
Version: 1.15.1 | Vendor: Fedora Project |
Release: 3.fc39 | Build date: Sat Jul 22 03:04:24 2023 |
Group: Unspecified | Build host: buildvm-a64-05.iad2.fedoraproject.org |
Size: 2495847 | Source RPM: samtools-1.15.1-3.fc39.src.rpm |
Packager: Fedora Project | |
Url: http://www.htslib.org/ | |
Summary: Tools for nucleotide sequence alignments in the SAM format |
SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.
MIT
* Sat Jul 22 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.15.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Sat Jan 21 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.15.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Mon Aug 15 2022 Jun Aruga <jaruga@redhat.com> - 1.15.1-1 - Update to samtools version 1.15.1 * Sat Jul 23 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.13-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Sat Jan 22 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.13-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Fri Jul 23 2021 John Marshall <jmarshall@hey.com> - 1.13-1 - Update to samtools version 1.13 - Upstream now includes individual man pages for each samtools subcommand - misc/varfilter.py has been removed upstream, and other scripts added * Fri Jul 23 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.9-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
/usr/bin/ace2sam /usr/bin/blast2sam.pl /usr/bin/bowtie2sam.pl /usr/bin/export2sam.pl /usr/bin/fasta-sanitize.pl /usr/bin/interpolate_sam.pl /usr/bin/maq2sam-long /usr/bin/maq2sam-short /usr/bin/md5fa /usr/bin/md5sum-lite /usr/bin/novo2sam.pl /usr/bin/plot-ampliconstats /usr/bin/plot-bamstats /usr/bin/psl2sam.pl /usr/bin/sam2vcf.pl /usr/bin/samtools /usr/bin/samtools.pl /usr/bin/seq_cache_populate.pl /usr/bin/soap2sam.pl /usr/bin/wgsim /usr/bin/wgsim_eval.pl /usr/bin/zoom2sam.pl /usr/lib/.build-id /usr/lib/.build-id/3d /usr/lib/.build-id/3d/e52eecd9bf46aa3d3b059b27d8c337a3f8d85b /usr/lib/.build-id/41 /usr/lib/.build-id/41/7a668a378f22d48ca702c317f6d749f8c2b864 /usr/lib/.build-id/71 /usr/lib/.build-id/71/f99a33519b97bcd1289fb4ec1d1b1458be3b11 /usr/lib/.build-id/97 /usr/lib/.build-id/97/d3063fb6f32dcb40c400e7520b5c0741796833 /usr/lib/.build-id/c9 /usr/lib/.build-id/c9/71395a3d3c25bc0747e858dfa27a07e437820d /usr/lib/.build-id/cb /usr/lib/.build-id/cb/c036ab971142fe09253f72118c9e7a0c878f77 /usr/lib/.build-id/de /usr/lib/.build-id/de/e6771c868b4a14687be9d53e218a5cd031b3fd /usr/share/doc/samtools /usr/share/doc/samtools/AUTHORS /usr/share/doc/samtools/ChangeLog.old /usr/share/doc/samtools/NEWS /usr/share/doc/samtools/examples /usr/share/doc/samtools/examples/00README.txt /usr/share/doc/samtools/examples/ex1.fa /usr/share/doc/samtools/examples/ex1.sam.gz /usr/share/doc/samtools/examples/toy.fa /usr/share/doc/samtools/examples/toy.sam /usr/share/licenses/samtools /usr/share/licenses/samtools/LICENSE /usr/share/man/man1/samtools-addreplacerg.1.gz /usr/share/man/man1/samtools-ampliconclip.1.gz /usr/share/man/man1/samtools-ampliconstats.1.gz /usr/share/man/man1/samtools-bedcov.1.gz /usr/share/man/man1/samtools-calmd.1.gz /usr/share/man/man1/samtools-cat.1.gz /usr/share/man/man1/samtools-collate.1.gz /usr/share/man/man1/samtools-consensus.1.gz /usr/share/man/man1/samtools-coverage.1.gz /usr/share/man/man1/samtools-depad.1.gz /usr/share/man/man1/samtools-depth.1.gz /usr/share/man/man1/samtools-dict.1.gz /usr/share/man/man1/samtools-faidx.1.gz /usr/share/man/man1/samtools-fasta.1.gz /usr/share/man/man1/samtools-fastq.1.gz /usr/share/man/man1/samtools-fixmate.1.gz /usr/share/man/man1/samtools-flags.1.gz /usr/share/man/man1/samtools-flagstat.1.gz /usr/share/man/man1/samtools-fqidx.1.gz /usr/share/man/man1/samtools-head.1.gz /usr/share/man/man1/samtools-idxstats.1.gz /usr/share/man/man1/samtools-import.1.gz /usr/share/man/man1/samtools-index.1.gz /usr/share/man/man1/samtools-markdup.1.gz /usr/share/man/man1/samtools-merge.1.gz /usr/share/man/man1/samtools-mpileup.1.gz /usr/share/man/man1/samtools-phase.1.gz /usr/share/man/man1/samtools-quickcheck.1.gz /usr/share/man/man1/samtools-reheader.1.gz /usr/share/man/man1/samtools-rmdup.1.gz /usr/share/man/man1/samtools-samples.1.gz /usr/share/man/man1/samtools-sort.1.gz /usr/share/man/man1/samtools-split.1.gz /usr/share/man/man1/samtools-stats.1.gz /usr/share/man/man1/samtools-targetcut.1.gz /usr/share/man/man1/samtools-tview.1.gz /usr/share/man/man1/samtools-view.1.gz /usr/share/man/man1/samtools.1.gz /usr/share/man/man1/wgsim.1.gz
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Fabrice Bellet, Tue Jul 9 22:15:25 2024