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R-qtl-1.60-3.fc39 RPM for ppc64le

From Fedora 39 for ppc64le / r

Name: R-qtl Distribution: Fedora Project
Version: 1.60 Vendor: Fedora Project
Release: 3.fc39 Build date: Tue Jul 25 08:29:07 2023
Group: Unspecified Build host: buildvm-ppc64le-26.iad2.fedoraproject.org
Size: 7876074 Source RPM: R-qtl-1.60-3.fc39.src.rpm
Packager: Fedora Project
Url: https://rqtl.org/
Summary: Tools for analyzing QTL experiments
R-qtl is an extensible, interactive environment for mapping
quantitative trait loci (QTLs) in experimental crosses. Our goal is to
make complex QTL mapping methods widely accessible and allow users to
focus on modeling rather than computing.

A key component of computational methods for QTL mapping is the hidden
Markov model (HMM) technology for dealing with missing genotype
data. We have implemented the main HMM algorithms, with allowance for
the presence of genotyping errors, for backcrosses, intercrosses, and
phase-known four-way crosses.

The current version of R-qtl includes facilities for estimating
genetic maps, identifying genotyping errors, and performing single-QTL
genome scans and two-QTL, two-dimensional genome scans, by interval
mapping (with the EM algorithm), Haley-Knott regression, and multiple
imputation. All of this may be done in the presence of covariates
(such as sex, age or treatment). One may also fit higher-order QTL
models by multiple imputation and Haley-Knott regression.

Provides

Requires

License

GPL-3.0-only

Changelog

* Sun Jul 23 2023 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.60-3
  - Fix build requires
* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.60-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Tue May 16 2023 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.60-1
  - Update to 1.60
  - Drop workaround for broken openblas on aarch64 in RHEL 8 and 9
    Fixed in RHEL 8.8 and 9.2 respectively
* Fri Apr 21 2023 Iñaki Úcar <iucar@fedoraproject.org> - 1.58-2
  - R-maint-sig mass rebuild
* Wed Jan 25 2023 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.58-1
  - Update to 1.58
  - Workaround broken openblas on aarch64 in RHEL 8 and 9
* Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.52-4
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Sep 01 2022 Tom Callaway <spot@fedoraprojet.org> - 1.52-3
  - rebuild for R 4.2.1
* Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.52-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Wed Jul 13 2022 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.52-1
  - Update to 1.52
* Wed Jan 19 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Dec 15 2021 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.50-1
  - Update to 1.50

Files

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Fabrice Bellet, Tue Jul 9 22:23:46 2024