lagan-2.0-42.fc41 RPM for x86_64

From Fedora 41 for x86_64 / l

LAGAN toolkit is a set of tools for local, global, and multiple alignment of
DNA sequences.  Please visit http://lagan.stanford.edu for publications
describing LAGAN and its components.

The 4 main parts of LAGAN are:

1. CHAOS local alignment tool
2. LAGAN pairwise global alignment tool
3. MLAGAN multiple global alignment tool.
4. Shuffle-LAGAN pairwise global alignment

Provides

• lagan
• lagan(x86-64)

Requires

• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.3)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_2.7)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(:VERSION) >= 5.5.0
• perl(Cwd)
• perl(File::Basename)
• perl(File::Copy)
• perl(File::Path)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(IPC::Open2)
• perl(constant)
• perl(strict)
• perl(warnings)
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)

License

GPLv2

Changelog

* Thu Jul 18 2024 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-42
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild
* Thu Jan 25 2024 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-41
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Sun Jan 21 2024 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-40
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Thu Jul 20 2023 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-39
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-38
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Fri Jan 13 2023 Florian Weimer <fweimer@redhat.com> - 2.0-37
  - C99 compatibility fixes (#2160661)
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-36
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

Files

/usr/bin/chaos
/usr/bin/lagan
/usr/bin/mlagan
/usr/bin/prolagan
/usr/bin/slagan
/usr/lib/.build-id
/usr/lib/.build-id/16
/usr/lib/.build-id/16/4191546e5217ccc95c7e94a471cfca38ada35d
/usr/lib/.build-id/1c
/usr/lib/.build-id/1c/25ab17ccbf1097e95060c4cbb49d7bb0d236e1
/usr/lib/.build-id/2c
/usr/lib/.build-id/2c/714a68fb02e967797cd7c2809ce64eafe00568
/usr/lib/.build-id/33
/usr/lib/.build-id/33/be2478404682083c10a74fb5a37cbb58c9f47d
/usr/lib/.build-id/44
/usr/lib/.build-id/44/a6974a322cdbcce102be14167565100e7becc2
/usr/lib/.build-id/47
/usr/lib/.build-id/47/bd6b1081d20f11010f4ef7c7027a7e4c6e7ade
/usr/lib/.build-id/4c
/usr/lib/.build-id/4c/87afa6d50f4d17f1ba4d6dbbed88b3aabed1f4
/usr/lib/.build-id/4f
/usr/lib/.build-id/4f/7ea2acf516aafb56630bef10c94dfe42a13f5a
/usr/lib/.build-id/64
/usr/lib/.build-id/64/c1df04ac7f3c7604df73c67a629be00aafd05a
/usr/lib/.build-id/72
/usr/lib/.build-id/72/15c3bcbcb30660ee4cd7a2c5df4612e8137006
/usr/lib/.build-id/74
/usr/lib/.build-id/74/86b94895ae3b54dff2bb833bbf1a9de08fcb28
/usr/lib/.build-id/97
/usr/lib/.build-id/97/d08915a11ced89baacca6528b5b00cc2d953d4
/usr/lib/.build-id/a9
/usr/lib/.build-id/a9/71c2cd35101e72cd8e99d8b7498ecc6ef42c13
/usr/lib/.build-id/a9/91a85105685c92c8156cc1c642f8c1e5e9ba27
/usr/lib/.build-id/b3
/usr/lib/.build-id/b3/f0cdc397d717602bbd34a178d045f0642fcbee
/usr/lib/.build-id/bb
/usr/lib/.build-id/bb/d453fc515042a80b15327348a238ad14936436
/usr/lib/.build-id/be
/usr/lib/.build-id/be/f175c3905df97d888b2b84aedc209eb2b0c873
/usr/lib/.build-id/c5
/usr/lib/.build-id/c5/0b64f5067f041931d1b6a7605f75d0f3445c59
/usr/lib/.build-id/d7
/usr/lib/.build-id/d7/998c3bce3fb93b230c6f6b472acc2031ba5ac3
/usr/lib/.build-id/e8
/usr/lib/.build-id/e8/848579f4e8d41b59bc7532ff8d960316b5965a
/usr/lib/.build-id/e8/864c0d5ff89f3fb962547c89d701d2ac62ec12
/usr/lib/.build-id/eb
/usr/lib/.build-id/eb/b5d0f3f0b0a2d204bccb4f49bd86e2ca702eb3
/usr/lib/.build-id/f8
/usr/lib/.build-id/f8/20c6e914379e7c14094d548d42682b8a898685
/usr/lib64/lagan
/usr/lib64/lagan/anal_gloc.pl
/usr/lib64/lagan/anchors
/usr/lib64/lagan/blosum62.txt
/usr/lib64/lagan/blosum62s.txt
/usr/lib64/lagan/glocal
/usr/lib64/lagan/nucmatrix.txt
/usr/lib64/lagan/order
/usr/lib64/lagan/rechaos.pl
/usr/lib64/lagan/supermap.pl
/usr/lib64/lagan/test.score
/usr/lib64/lagan/utils
/usr/lib64/lagan/utils/Glue
/usr/lib64/lagan/utils/bin2bl
/usr/lib64/lagan/utils/bin2mf
/usr/lib64/lagan/utils/cextract
/usr/lib64/lagan/utils/cmerge2.pl
/usr/lib64/lagan/utils/contigorder
/usr/lib64/lagan/utils/cstat
/usr/lib64/lagan/utils/dotplot
/usr/lib64/lagan/utils/draft.pl
/usr/lib64/lagan/utils/fa2xfa
/usr/lib64/lagan/utils/getbounds
/usr/lib64/lagan/utils/getcontigpos
/usr/lib64/lagan/utils/getlength
/usr/lib64/lagan/utils/getoverlap
/usr/lib64/lagan/utils/mextract.pl
/usr/lib64/lagan/utils/mf2bin.pl
/usr/lib64/lagan/utils/mpretty.pl
/usr/lib64/lagan/utils/mproject.pl
/usr/lib64/lagan/utils/mrun.pl
/usr/lib64/lagan/utils/mrunfile.pl
/usr/lib64/lagan/utils/mrunpairs.pl
/usr/lib64/lagan/utils/mviz.pl
/usr/lib64/lagan/utils/overlay
/usr/lib64/lagan/utils/rc
/usr/lib64/lagan/utils/scorealign
/usr/lib64/lagan/utils/scorecontigs
/usr/lib64/lagan/utils/seqmerge
/usr/lib64/lagan/xmfa2mfa.pl
/usr/share/doc/lagan
/usr/share/doc/lagan/LICENSE
/usr/share/doc/lagan/README.FIRST
/usr/share/doc/lagan/README.chaos
/usr/share/doc/lagan/README.lagan
/usr/share/doc/lagan/README.mlagan
/usr/share/doc/lagan/README.shuffle
/usr/share/doc/lagan/README.tools
/usr/share/doc/lagan/sample.fasta
/usr/share/doc/lagan/sample.params

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Fabrice Bellet, Sun Mar 9 21:33:41 2025