reporter {Biobase} | R Documentation |
Example data.frame representing reporter information
Description
The reporter
object is a 500 by 1 data frame. The rows represent
the 500 probe IDs in the geneData
data. The values in
reporter
are the predefined probe types for the probes.
reporter
is used in conjunction with the geneData
object
and its associates.
Usage
data(reporter)
Format
A 500 by 1 data frame
Details
There are 10 predefined probe types:
-
AFFX-
Quality Control (QC) -
_f_
SequenceFamily -
_g_
CommonGroups -
_s_
SimilarityConstraint -
_r_
RulesDropped -
_i_
Incomplete -
_b_
AmbiguousProbeSet -
_l_
LongProbeSet -
_at
AntiSenseTarget -
_st
SenseTarget
Source
Affymetrix GeneChip Expression Analysis Data Analysis Fundamentals (http://www.affymetrix.com/Auth/support/downloads/manuals/data_analysis_fundamentals_manual.pdf)
Examples
data(reporter)
## maybe str(reporter) ; plot(reporter) ...
[Package Biobase version 2.56.0 Index]